3ZTC pVHL54-213-EloB-EloC complex _ (2S,4R)-N-((1,1'-biphenyl)-4-ylmethyl)- 4-hydroxy-1-(2-(3-methylisoxazol-5-yl)acetyl)pyrrolidine-2- carboxamide date
authors Molle, I.Van., Buckley, D.L., Crews, C.M., Ciulli, A.
compound source
symmetry
R_factor
R_Free 0.31705
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.65
ligand TR0 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, J, D, G


H, K, E, B


Primary referenceDissecting fragment-based lead discovery at the von hippel-lindau protein:hypoxia inducible factor 1alpha protein-protein interface., Van Molle I, Thomann A, Buckley DL, So EC, Lang S, Crews CM, Ciulli A, Chem Biol. 2012 Oct 26;19(10):1300-12. doi: 10.1016/j.chembiol.2012.08.015. PMID:23102223
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]
  • Biological Unit Coordinates (3ztc.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (3ztc.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (3ztc.pdb3.gz) 55 Kb
  • Biological Unit Coordinates (3ztc.pdb4.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 3ZTC
  • CSU: Contacts of Structural Units for 3ZTC
  • Structure Factors (680 Kb)
  • Retrieve 3ZTC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZTC from S2C, [Save to disk]
  • Re-refined 3ztc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZTC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZTC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZTC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ztc_L] [3ztc_J] [3ztc_A] [3ztc] [3ztc_G] [3ztc_I] [3ztc_C] [3ztc_B] [3ztc_H] [3ztc_D] [3ztc_K] [3ztc_E] [3ztc_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3ZTC: [Skp1] [UBQ ] by SMART
  • Other resources with information on 3ZTC
  • Community annotation for 3ZTC at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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