3ZU3 Oxidoreductase date Jul 13, 2011
title Structure Of The Enoyl-Acp Reductase Fabv From Yersinia Pest The Cofactor Nadh (Mr, Cleaved Histag)
authors M.W.Hirschbeck, J.Kuper, C.Kisker
compound source
Molecule: Putative Reductase Ypo4104y4119yp_4011
Chain: A
Synonym: Enoyl-Acp Reductase
Engineered: Yes
Organism_scientific: Yersinia Pestis
Organism_taxid: 214092
Strain: Co92
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet15b
symmetry Space Group: P 31 2 1
R_factor 0.168 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.160 102.160 84.761 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand GOL, NA, NAI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the Yersinia pestis FabV enoyl-ACP reductase and its interaction with two 2-pyridone inhibitors., Hirschbeck MW, Kuper J, Lu H, Liu N, Neckles C, Shah S, Wagner S, Sotriffer CA, Tonge PJ, Kisker C, Structure. 2012 Jan 11;20(1):89-100. PMID:22244758
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (3zu3.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 3ZU3
  • CSU: Contacts of Structural Units for 3ZU3
  • Structure Factors (626 Kb)
  • Retrieve 3ZU3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZU3 from S2C, [Save to disk]
  • Re-refined 3zu3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZU3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZU3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZU3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zu3_A] [3zu3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ZU3
  • Community annotation for 3ZU3 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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