3ZUI Immune System date Jul 19, 2011
title Omci In Complex With Palmitoleic Acid
authors P.Roversi, I.Maillet, D.Togbe, I.Couillin, V.F.J.Quesniaux, M.Tei N.Ahmat, O.Lissina, W.Boland, K.Ploss, J.J.E.Caesar, S.Leonharts B.Ryffel, S.M.Lea, M.A.Nunn
compound source
Molecule: Complement Inhibitor
Chain: A
Synonym: Omci
Engineered: Yes
 Organism_scientific: Ornithodoros Moubata
Organism_taxid: 6938
Tissue: Salivary Gland
Expression_system: Escherichia Coli
Expression_system_taxid: 83333
Expression_system_strain: K-12
Expression_system_variant: Wcm105
symmetry Space Group: P 21 21 21
R_factor 0.197 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.430 51.890 68.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand PAM enzyme
Primary referenceBifunctional Lipocalin Ameliorates Murine Immune Complex-Induced Acute Lung Injury., Roversi P, Ryffel B, Togbe D, Maillet I, Teixeira M, Ahmat N, Paesen GC, Lissina O, Boland W, Ploss K, Caesar JJ, Leonhartsberger S, Lea SM, Nunn MA, J Biol Chem. 2013 Apr 26. PMID:23625922
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (3zui.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 3ZUI
  • CSU: Contacts of Structural Units for 3ZUI
  • Structure Factors (539 Kb)
  • Retrieve 3ZUI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZUI from S2C, [Save to disk]
  • Re-refined 3zui structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ZUI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ZUI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZUI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zui] [3zui_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3ZUI
  • Community annotation for 3ZUI at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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