428D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, SPM enzyme
Primary referenceStructure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations., Shui X, Sines CC, McFail-Isom L, VanDerveer D, Williams LD, Biochemistry 1998 Dec 1;37(48):16877-87. PMID:9836580
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (428d.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 428D
  • CSU: Contacts of Structural Units for 428D
  • Likely Quarternary Molecular Structure file(s) for 428D
  • Structure Factors (76 Kb)
  • Retrieve 428D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 428D from S2C, [Save to disk]
  • Re-refined 428d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 428D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [428d] [428d_A] [428d_B]
  • SWISS-PROT database:

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