4A0J Cell Cycle date Sep 09, 2011
title Crystal Structure Of Survivin Bound To The Phosphorylated N- Tail Of Histone H3
authors A.A.Jeyaprakash, C.Basquin, U.Jayachandran, E.Conti
compound source
Molecule: Baculoviral Iap Repeat-Containing Protein 5
Chain: A, B
Synonym: Survivin, Apoptosis Inhibitor 4, Apoptosis Inhibit Survivin;
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Histone H3 Peptide
Chain: C, D
Engineered: Yes
Other_details: Phosphorylated At Thr3

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.198 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.365 70.896 81.465 90.00 129.03 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand TPO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis for the Recognition of Phosphorylated Histone H3 by the Survivin Subunit of the Chromosomal Passenger Complex., Jeyaprakash AA, Basquin C, Jayachandran U, Conti E, Structure. 2011 Oct 25. PMID:22032967
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4a0j.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (4a0j.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 4A0J
  • CSU: Contacts of Structural Units for 4A0J
  • Structure Factors (598 Kb)
  • Retrieve 4A0J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4A0J from S2C, [Save to disk]
  • Re-refined 4a0j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4A0J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4A0J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4A0J, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4a0j] [4a0j_D] [4a0j_A] [4a0j_C] [4a0j_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4A0J: [BIR ] by SMART
  • Other resources with information on 4A0J
  • Community annotation for 4A0J at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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