4A3C | Transcription | date | Sep 30, 2011 |
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title | Rna Polymerase II Initial Transcribing Complex With A 5nt Dn Hybrid | ||||||||||||||
authors | A.C.M.Cheung, S.Sainsbury, P.Cramer | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb1 Chain: A Fragment: Residues 1-1732 Synonym: Rpb1, Rna Polymerase II Subunit 1, Rna Polymerase B1, Dna-Directed Rna Polymerase III Largest Subunit, Rna Po II Subunit B220; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb2 Chain: B Synonym: Rpb2, Rna Polymerase II Subunit 2, B150, Dna-Direc Polymerase II 140 Kda Polypeptide; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb3 Chain: C Synonym: Rpb3, Rna Polymerase II Subunit 3, Rna Polymerase B3, B44.5, Dna-Directed Rna Polymerase II 45 Kda Polypeptid |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb4 Chain: D Synonym: Rpb4, Rna Polymerase II Subunit B4, B32, Dna-Direc Polymerase II 32 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun 1; Chain: E Synonym: Rpb5, Rna Polymerases I, II, And III Subunit Abc1, Dna-Directed Rna Polymerases I, II, And III 27 Kda Polypept |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun 2; Chain: F Synonym: Rpb6, Rna Polymerases I, II, And III Subunit Abc2, Dna-Directed Rna Polymerases I, II, And III 23 Kda Polypept |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Rpb7, Dna-Directed Rna Polymerase II Subunit Rpb7 Chain: G Synonym: Rna Polymerase II Subunit B7, B16 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun 3; Chain: H Synonym: Rpb8, Rna Polymerases I, II, And III Subunit Abc3, Abc14.5, Dna-Directed Rna Polymerases I, II, And III 14.5 K Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb9 Chain: I Synonym: Rbp9, Rna Polymerase II Subunit B9, B12.6, Dna-Dir Polymerase II 14.2 Kda Polypeptide, Dna-Directed Rna Polyme Subunit 9; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun 5; Chain: J Synonym: Rpb10, Rna Polymerases I, II, And III Subunit Abc5 Beta, Abc8, Dna-Directed Rna Polymerases I, II, And III 8.3 Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb11 Chain: K Synonym: Rpb11, Rna Polymerase II Subunit B11, B13.6, Dna-D Rna Polymerase II 13.6 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun 4; Chain: L Synonym: Rpb12, Rna Polymerases I\,II\,And III Subunit Abc4 Alpha; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Non Template Dna Chain: N Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Transcript Rna, 5'-R(Cpapgpgpap)-3' Chain: P Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Template Dna Chain: T Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
symmetry | Space Group: C 2 2 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.50 Å | ||||||||||||
ligand | BRU, MG, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structural basis of initial RNA polymerase II transcription., Cheung AC, Sainsbury S, Cramer P, EMBO J. 2011 Nov 4. doi: 10.1038/emboj.2011.396. PMID:22056778 |
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