4A3D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BRU, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • RNA-directed 5'-3' RNA polym...


  • B
  • RNA-directed 5'-3' RNA polym...


  • C
  • RNA-directed 5'-3' RNA polym...


  • D
  • RNA-directed 5'-3' RNA polym...


  • E
  • RNA-directed 5'-3' RNA polym...


  • F
  • RNA-directed 5'-3' RNA polym...


  • G
  • RNA-directed 5'-3' RNA polym...


  • H
  • RNA-directed 5'-3' RNA polym...


  • I
  • RNA-directed 5'-3' RNA polym...


  • J
  • RNA-directed 5'-3' RNA polym...

  • DNA-directed RNA polymerase ...
  • K
  • RNA-directed 5'-3' RNA polym...


  • L
  • RNA-directed 5'-3' RNA polym...


  • Primary referenceStructural basis of initial RNA polymerase II transcription., Cheung AC, Sainsbury S, Cramer P, EMBO J. 2011 Nov 4. doi: 10.1038/emboj.2011.396. PMID:22056778
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1352 Kb) [Save to disk]
  • Biological Unit Coordinates (4a3d.pdb1.gz) 1339 Kb
  • LPC: Ligand-Protein Contacts for 4A3D
  • CSU: Contacts of Structural Units for 4A3D
  • Structure Factors (2305 Kb)
  • Retrieve 4A3D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4A3D from S2C, [Save to disk]
  • Re-refined 4a3d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4A3D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4a3d] [4a3d_A] [4a3d_B] [4a3d_C] [4a3d_D] [4a3d_E] [4a3d_F] [4a3d_G] [4a3d_H] [4a3d_I] [4a3d_J] [4a3d_K] [4a3d_L] [4a3d_N] [4a3d_P] [4a3d_T]
  • SWISS-PROT database:
  • Domains found in 4A3D: [RNA_pol_Rpb6] [RPOL4c] [RPOL8c] [RPOL9] [RPOLA_N] [RPOLCX] [RPOLD] [S1] [ZnF_C2C2 ] by SMART

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