4A3M | Transcription | date | Sep 30, 2011 |
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title | Rna Polymerase II Initial Transcribing Complex With A 4nt Dn Hybrid And Soaked With Ampcpp | ||||||||||||||
authors | A.C.M.Cheung, S.Sainsbury, P.Cramer | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb1 Chain: A Fragment: Residues 1-1732 Synonym: Rna Polymerase II Subunit 1, Rna Polymerase II Sub Dna-Directed Rna Polymerase III Largest Subunit, Rpb1, Rna II Subunit B220; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb2 Chain: B Synonym: Rna Polymerase II Subunit 2, B150, Rpb2, Dna-Direc Polymerase II 140 Kda Polypeptide; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb3 Chain: C Synonym: Rna Polymerase II Subunit 3, Rna Polymerase II Sub B44.5, Dna-Directed Rna Polymerase II 45 Kda Polypeptide, R |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb4 Chain: D Synonym: Rna Polymerase II Subunit B4, B32, Rpb4, Dna-Direc Polymerase II 32 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: E Synonym: Rna Polymerases I, II, And III Subunit Abc1, Abc27 Directed Rna Polymerases I, II, And III 27 Kda Polypeptide, |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: F Synonym: Rna Polymerases I, II, And III Subunit Abc2, Abc23 Directed Rna Polymerases I, II, And III 23 Kda Polypeptide, |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb7 Chain: G Synonym: Rna Polymerase II Subunit B7, B16, Rpb7 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: H Synonym: Rna Polymerases I, II, And III Subunit Abc3, Abc14 Abc14.5, Dna-Directed Rna Polymerases I, II, And III 14.5 K Polypeptide, Rpb8; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb9 Chain: I Synonym: Rna Polymerase II Subunit B9, B12.6, Rpb9, Dna-Dir Polymerase II 14.2 Kda Polypeptide, Dna-Directed Rna Polyme Subunit 9; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: J Synonym: Rna Polymerases I, II, And III Subunit Abc5, Abc10 Abc8, Dna-Directed Rna Polymerases I, II, And III 8.3 Kda Polypeptide, Rpb10; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb11 Chain: K Synonym: Rna Polymerase II Subunit B11, B13.6, Rpb11, Dna-D Rna Polymerase II 13.6 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: L Synonym: Rna Polymerases I, II, And III Subunit Abc4, Abc10 Rpb12; |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: 5'-D(Apapgptpapcptp)-3' Chain: N Synonym: Non Template Dna Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: 5'-R(Apgpgpa)-3' Chain: P Synonym: Transcript Rna Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
Molecule: 5'-D(Apgpcptpcpapapgptpapcptptptp Tptpcpcpbrupgpgptpcpaptpt)-3'; Chain: T Synonym: Template Dna Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 | ||||||||||||||
symmetry | Space Group: C 2 2 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.90 Å | ||||||||||||
ligand | APC, BRU, MG, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structural basis of initial RNA polymerase II transcription., Cheung AC, Sainsbury S, Cramer P, EMBO J. 2011 Nov 4. doi: 10.1038/emboj.2011.396. PMID:22056778 |
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