4AFY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, NA	enzyme
Primary reference	Crystal Structure of an EAL Domain in Complex with Reaction Product 5'-pGpG., Robert-Paganin J, Nonin-Lecomte S, Rety S, PLoS One. 2012;7(12):e52424. doi: 10.1371/journal.pone.0052424. Epub 2012 Dec 20. PMID:23285035

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk] Biological Unit Coordinates (4afy.pdb1.gz) 86 Kb LPC: Ligand-Protein Contacts for 4AFY CSU: Contacts of Structural Units for 4AFY Structure Factors (762 Kb) Retrieve 4AFY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AFY from S2C, [Save to disk] Re-refined 4afy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4AFY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4afy] [4afy_A] [4afy_B] [4afy_C] [4afy_D] SWISS-PROT database: Domain found in 4AFY: [EAL ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---