4AMZ	Hydrolase	date	Mar 14, 2012
title	Prolyl Oligopeptidase From Porcine Brain With A Covalently B Inhibitor Ic-2
authors	K.Kaszuba, T.Rog, R.Danne, P.Canning, V.Fulop, T.Juhasz, Z.Szeltne Pierre, A.Garcia-Horsman, P.T.Mannisto, M.Karttunen, J.Hokkanen
compound		source
Molecule: Prolyl Endopeptidase Chain: A Synonym: Pe, Post-Proline Cleaving Enzyme Ec: 3.4.21.26 Engineered: Yes		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Brain Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm105
symmetry	Space Group: P 21 21 21	R_factor 0.159 R_Free 0.204
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.100 99.500 110.800 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	2P4, GOL	enzyme	Hydrolase E.C.3.4.21.26 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Molecular dynamics, crystallography and mutagenesis studies on the substrate gating mechanism of prolyl oligopeptidase., Kaszuba K, Rog T, Danne R, Canning P, Fulop V, Juhasz T, Szeltner Z, St Pierre JF, Garcia-Horsman A, Mannisto PT, Karttunen M, Hokkanen J, Bunker A, Biochimie. 2012 Jun;94(6):1398-411. Epub 2012 Mar 30. PMID:22484394

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk] Biological Unit Coordinates (4amz.pdb1.gz) 237 Kb LPC: Ligand-Protein Contacts for 4AMZ CSU: Contacts of Structural Units for 4AMZ Structure Factors (420 Kb) Retrieve 4AMZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AMZ from S2C, [Save to disk] Re-refined 4amz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 4AMZ

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4AMZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4amz_A] [4amz] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4AMZ

Community annotation for 4AMZ at PDBWiki (http://pdbwiki.org)

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