4AR5 Electron Transport date Apr 20, 2012
title X-Ray Crystallographic Structure Of The Oxidised Form Perdeu Pyrococcus Furiosus Rubredoxin In D2o At 295k (In Quartz Ca To 1.00 Angstrom Resolution.
authors M.G.Cuypers, S.A.Mason, M.P.Blakeley, E.P.Mitchell, M.Haertlein, V.T.Forsyth
compound source
Molecule: Rubredoxin
Chain: A
Synonym: Rd
Engineered: Yes
Other_details: Oxidised State (Fe III)
 Organism_scientific: Pyrococcus Furiosus
Organism_taxid: 2261
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet28a
symmetry Space Group: P 21 21 21
R_factor 0.1095 R_Free 0.1189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.361 35.316 43.993 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.00 Å
ligand FE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceNear-Atomic Resolution Neutron Crystallography on Perdeuterated Pyrococcus furiosus Rubredoxin: Implication of Hydronium Ions and Protonation State Equilibria in Redox Changes., Cuypers MG, Mason SA, Blakeley MP, Mitchell EP, Haertlein M, Forsyth VT, Angew Chem Int Ed Engl. 2013 Jan 14;52(3):1022-5. doi: 10.1002/anie.201207071., Epub 2012 Dec 6. PMID:23225503
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (4ar5.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 4AR5
  • CSU: Contacts of Structural Units for 4AR5
  • Structure Factors (723 Kb)
  • Retrieve 4AR5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AR5 from S2C, [Save to disk]
  • Re-refined 4ar5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AR5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ar5] [4ar5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4AR5
  • Community annotation for 4AR5 at PDBWiki (http://pdbwiki.org)
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