4ARY Toxin date Apr 27, 2012
title Lepidopteran-Specific Toxin Cry1ac In Complex With Receptor Specificity Determinant Galnac
authors D.J.Derbyshire, J.Carroll, D.J.Ellar, J.Li
compound source
Molecule: Pesticidal Crystal Protein Cry1ac
Chain: A, B, C, D
Fragment: Activated Toxin Obtained By Trypsin Cleavage, Res 611;
Synonym: 133 Kda Crystal Protein, Crystaline Entomocidal Pr Insecticidal Delta-Endotoxin Cryia(C)
 Organism_scientific: Bacillus Thuringiensis Serovar Kurstak
Organism_taxid: 29339
Variant: Hd-73
Atcc: 35866
symmetry Space Group: P 1 21 1
R_factor 0.215 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.360 51.190 210.650 90.00 105.75 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand 13D, NGA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystallization of the Bacillus thuringiensis toxin Cry1Ac and its complex with the receptor ligand N-acetyl-D-galactosamine., Derbyshire DJ, Ellar DJ, Li J, Acta Crystallogr D Biol Crystallogr. 2001 Dec;57(Pt 12):1938-44. Epub 2001 Nov, 21. PMID:11717524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (369 Kb) [Save to disk]
  • Biological Unit Coordinates (4ary.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (4ary.pdb2.gz) 96 Kb
  • Biological Unit Coordinates (4ary.pdb3.gz) 95 Kb
  • Biological Unit Coordinates (4ary.pdb4.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 4ARY
  • CSU: Contacts of Structural Units for 4ARY
  • Structure Factors (371 Kb)
  • Retrieve 4ARY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ARY from S2C, [Save to disk]
  • Re-refined 4ary structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 4ARY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ARY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ary_A] [4ary_C] [4ary] [4ary_B] [4ary_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ARY
  • Community annotation for 4ARY at PDBWiki (http://pdbwiki.org)

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