4AS5 Hydrolase date Apr 27, 2012
title Structure Of Mouse Inositol Monophosphatase 1
authors N.Singh, M.Knight, A.C.Halliday, N.A.Lack, E.D.Lowe, G.C.Churchil
compound source
Molecule: Inositol Monophosphatase 1
Chain: A, B, C, D
Synonym: Imp 1, Impase 1, Inositol-1(Or 4)- Monophosphatase Lithium-Sensitive Myo-Inositol Monophosphatase A1;
Ec: 3.1.3.25
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Blr(De3)
Expression_system_variant: Plyss
Expression_system_plasmid: Prset5a
symmetry Space Group: P 1 21 1
R_factor 0.1602 R_Free 0.2144
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.785 81.490 97.139 90.00 113.77 90.00
method X-Ray Diffractionresolution 2.43 Å
ligand EDO, GOL, IOD, MG, PO4 enzyme Hydrolase E.C.3.1.3.25 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCloning, expression, purification, crystallization and X-ray analysis of inositol monophosphatase from Mus musculus and Homo sapiens., Singh N, Halliday AC, Knight M, Lack NA, Lowe E, Churchill GC, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1149-52., doi: 10.1107/S1744309112035191. Epub 2012 Sep 22. PMID:23027737
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk]
  • Biological Unit Coordinates (4as5.pdb1.gz) 188 Kb
  • Biological Unit Coordinates (4as5.pdb2.gz) 187 Kb
  • LPC: Ligand-Protein Contacts for 4AS5
  • CSU: Contacts of Structural Units for 4AS5
  • Structure Factors (350 Kb)
  • Retrieve 4AS5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AS5 from S2C, [Save to disk]
  • Re-refined 4as5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AS5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AS5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AS5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4as5_A] [4as5_D] [4as5] [4as5_C] [4as5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4AS5
  • Community annotation for 4AS5 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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