4AYR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, IFL, NA, PE4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe reaction coordinate of a bacterial GH47 alpha-mannosidase: a combined quantum mechanical and structural approach., Thompson AJ, Dabin J, Iglesias-Fernandez J, Ardevol A, Dinev Z, Williams SJ, Bande O, Siriwardena A, Moreland C, Hu TC, Smith DK, Gilbert HJ, Rovira C, Davies GJ, Angew Chem Int Ed Engl. 2012 Oct 29;51(44):10997-1001. doi:, 10.1002/anie.201205338. Epub 2012 Sep 26. PMID:23012075
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (4ayr.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 4AYR
  • CSU: Contacts of Structural Units for 4AYR
  • Structure Factors (2030 Kb)
  • Retrieve 4AYR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AYR from S2C, [Save to disk]
  • Re-refined 4ayr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AYR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ayr] [4ayr_A]
  • SWISS-PROT database:

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