4B19 Toxin date Jul 09, 2012
title S. Aureus Pepa1 Nmr Structure
authors N.Sayed, S.Nonin-Lecomte, S.Rety, B.Felden
compound source
Molecule: Pepa1
Chain: A
Fragment: Residues 2-31
Engineered: Yes
Other_details: Full Toxin Of The Type I Ta System
Synthetic: Yes
Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
methodSolution NMR
Primary referenceFunctional and structural insights of a Staphylococcus aureus apoptotic-like membrane peptide from a Toxin-Antitoxin module., Sayed N, Nonin-Lecomte S, Rety S, Felden B, J Biol Chem. 2012 Nov 5. PMID:23129767
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4b19.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 4B19
  • Original NMR restraints for 4B19 from PDB
  • Retrieve 4B19 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B19 from S2C, [Save to disk]
  • View 4B19 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4B19
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B19, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b19] [4b19_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4B19
  • Community annotation for 4B19 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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