4B46 Structural Protein date Jul 27, 2012
title Cetz1 From Haloferax Volcanii - Gdp Bound Monomer
authors C.H.S.Aylett, I.G.Duggin, J.Lowe
compound source
Molecule: Cell Division Protein Ftsz
Chain: A
Synonym: Cetz1
Engineered: Yes
 Organism_scientific: Haloferax Volcanii
Organism_taxid: 2246
Atcc: 29605
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: C41
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phis17
symmetry Space Group: P 21 21 21
R_factor 0.174 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.339 62.214 96.496 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCetZ tubulin-like proteins control archaeal cell shape., Duggin IG, Aylett CH, Walsh JC, Michie KA, Wang Q, Turnbull L, Dawson EM, Harry EJ, Whitchurch CB, Amos LA, Lowe J, Nature. 2014 Dec 22. doi: 10.1038/nature13983. PMID:25533961
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (4b46.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 4B46
  • CSU: Contacts of Structural Units for 4B46
  • Structure Factors (1107 Kb)
  • Retrieve 4B46 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B46 from S2C, [Save to disk]
  • Re-refined 4b46 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4B46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4B46
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B46, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b46_A] [4b46]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4B46: [Tubulin ] by SMART
    • Other resources with information on 4B46
  • Community annotation for 4B46 at PDBWiki (http://pdbwiki.org)

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