OCA Atlas for 4B6D

4B6D

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, F, B, E, A, D

Primary reference

Centralspindlin links the mitotic spindle to the plasma membrane during cytokinesis., Lekomtsev S, Su KC, Pye VE, Blight K, Sundaramoorthy S, Takaki T, Collinson LM, Cherepanov P, Divecha N, Petronczki M, Nature. 2012 Dec 13;492(7428):276-9. doi: 10.1038/nature11773. PMID:23235882

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]

Biological Unit Coordinates (4b6d.pdb1.gz) 22 Kb

Biological Unit Coordinates (4b6d.pdb2.gz) 21 Kb

Biological Unit Coordinates (4b6d.pdb3.gz) 22 Kb

Biological Unit Coordinates (4b6d.pdb4.gz) 22 Kb

Biological Unit Coordinates (4b6d.pdb5.gz) 21 Kb

Biological Unit Coordinates (4b6d.pdb6.gz) 22 Kb

LPC: Ligand-Protein Contacts for 4B6D

CSU: Contacts of Structural Units for 4B6D

Structure Factors (296 Kb)

Retrieve 4B6D in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4B6D from S2C, [Save to disk]

Re-refined 4b6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4B6D in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4b6d] [4b6d_A] [4b6d_B] [4b6d_C] [4b6d_D] [4b6d_E] [4b6d_F]

SWISS-PROT database:

Domain found in 4B6D: [C1 ] by SMART

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