4BE2	Transferase Dna	date	Oct 08, 2012
title	Pfv Intasome With Inhibitor Xz-259
authors	S.Hare, P.Cherepanov
compound		source
Molecule: Pfv Integrase Chain: A, B Synonym: Integrase, In, P42in Ec: 2.7.7.- Engineered: Yes		Organism_scientific: Human Spumaretrovirus Organism_taxid: 11963 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: 19 Nucleotide Preprocessed Pfv Donor Dna (Non-Tra Strand); Chain: C Synonym: Pfv U5 Dna Engineered: Yes		Synthetic: Yes Organism_scientific: Human Spumaretrovirus Organism_taxid: 11963
Molecule: 17 Nucleotide Preprocessed Pfv Donor Dna (Transfe Strand) Apcpa)-3'; Chain: D Synonym: Pfv U5 Dna Engineered: Yes		Synthetic: Yes Organism_scientific: Human Spumaretrovirus Organism_taxid: 11963
symmetry	Space Group: P 41 21 2	R_factor 0.195 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 159.420 159.420 123.680 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.38 Å
ligand	GOL, MG, SO4, XZ2, ZN	enzyme	Transferase E.C.2.7.7 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Activities, crystal structures and molecular dynamics of dihydro-1H-isoindole derivatives, inhibitors of HIV-1 integrase., Metifiot M, Maddali K, Johnson BC, Hare S, Smith SJ, Zhao XZ, Marchand C, Burke TR, Hughes SH, Cherepanov P, Pommier Y, ACS Chem Biol. 2012 Oct 17. PMID:23075516

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk] Biological Unit Coordinates (4be2.pdb1.gz) 218 Kb LPC: Ligand-Protein Contacts for 4BE2 CSU: Contacts of Structural Units for 4BE2 Structure Factors (2628 Kb) Retrieve 4BE2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BE2 from S2C, [Save to disk] Re-refined 4be2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BE2 in 3D

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Visual 3D analysis of 4BE2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BE2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4be2_A] [4be2_C] [4be2_B] [4be2_D] [4be2] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4BE2

Community annotation for 4BE2 at PDBWiki (http://pdbwiki.org)

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