4BES Transferase date Mar 12, 2013
title Crystal Structure Of The Legionella Pneumophila Fic Domain- Containing Effector Ankx Protein In Complex With Cytidine Monophosphate And Phosphocholine
authors V.Campanacci, S.Mukherjee, C.R.Roy, J.Cherfils
compound source
Molecule: Phosphocholine Transferase Ankx
Chain: A
Fragment: Fic And Ankyrin Repeats Domains, Residues 2-484
Synonym: Pc Transferase, Ankyrin Repeat-Containing Protein
Ec: 2.7.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Legionella Pneumophila Subsp. Pneumoph Philadelphia 1;
Organism_taxid: 272624
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta Plyss
Expression_system_vector_type: Plasmid
Expression_system_vector: Pdest17
symmetry Space Group: P 21 21 2
R_factor 0.2005 R_Free 0.2585
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.275 122.304 54.985 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.54 Å
ligand C5P, PC, SO4 enzyme Transferase E.C.2.7.1 BRENDA
Primary referenceStructure of the Legionella effector AnkX reveals the mechanism of phosphocholine transfer by the FIC domain., Campanacci V, Mukherjee S, Roy CR, Cherfils J, EMBO J. 2013 Apr 9. doi: 10.1038/emboj.2013.82. PMID:23572077
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk]
  • Biological Unit Coordinates (4bes.pdb1.gz) 315 Kb
  • LPC: Ligand-Protein Contacts for 4BES
  • CSU: Contacts of Structural Units for 4BES
  • Structure Factors (309 Kb)
  • Retrieve 4BES in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BES from S2C, [Save to disk]
  • Re-refined 4bes structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BES in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BES
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BES, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bes_A] [4bes]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BES: [ANK ] by SMART
  • Other resources with information on 4BES
  • Community annotation for 4BES at PDBWiki (http://pdbwiki.org)

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