4BHR Cell Adhesion date Apr 05, 2013
title Structure Of The Ttha1221 Type Iv Pilin Protein From Thermus Thermophilus
authors V.Karuppiah, R.F.Collins, Y.Gao, A.Thistlethwaite, J.P.Derrick
compound source
Molecule: Pilin, Type Iv
Chain: A, B
Fragment: Residues 37-122
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 300852
Strain: Hb8
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet22b
symmetry Space Group: P 32 2 1
R_factor 0.21605 R_Free 0.24079
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.790 36.790 207.810 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
ligand SO4 enzyme
Primary referenceStructure and assembly of an inner membrane platform for initiation of type IV pilus biogenesis., Karuppiah V, Collins RF, Thistlethwaite A, Gao Y, Derrick JP, Proc Natl Acad Sci U S A. 2013 Nov 11. PMID:24218553
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (4bhr.pdb1.gz) 14 Kb
  • Biological Unit Coordinates (4bhr.pdb2.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 4BHR
  • CSU: Contacts of Structural Units for 4BHR
  • Structure Factors (128 Kb)
  • Retrieve 4BHR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BHR from S2C, [Save to disk]
  • Re-refined 4bhr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BHR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BHR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BHR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bhr_B] [4bhr] [4bhr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BHR
  • Community annotation for 4BHR at PDBWiki (http://pdbwiki.org)

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