4BIO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8XQ, FE, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference5-Carboxy-8-hydroxyquinoline is a Broad Spectrum 2-Oxoglutarate Oxygenase Inhibitor which Causes Iron Translocation., Hopkinson RJ, Tumber A, Yapp C, Chowdhury R, Aik W, Che KH, Li XS, Kristensen JBL, King ONF, Chan MC, Yeoh KK, Choi H, Walport LJ, Thinnes CC, Bush JT, Lejeune C, Rydzik AM, Rose NR, Bagg EA, McDonough MA, Krojer T, Yue WW, Ng SS, Olsen L, Brennan PE, Oppermann U, Muller-Knapp S, Klose RJ, Ratcliffe PJ, Schofield CJ, Kawamura A, Chem Sci. 2013 Aug 1;4(8):3110-3117. doi: 10.1039/C3SC51122G. PMID:26682036
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (4bio.pdb1.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 4BIO
  • CSU: Contacts of Structural Units for 4BIO
  • Structure Factors (974 Kb)
  • Retrieve 4BIO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BIO from S2C, [Save to disk]
  • Re-refined 4bio structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BIO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bio] [4bio_A]
  • SWISS-PROT database:
  • Domain found in 4BIO: [JmjC ] by SMART

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