4BKJ	Transferase	date	Apr 25, 2013
title	Crystal Structure Of The Human Ddr1 Kinase Domain In Complex Imatinib
authors	P.Canning, J.M.Elkins, S.Goubin, P.Mahajan, T.Krojer, M.Vollmar, F Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, A.Bullock
compound		source
Molecule: Epithelial Discoidin Domain-Containing Receptor 1 Chain: A, B Fragment: Kinase Domain, Resdiues 564-876 Synonym: Epithelial Discoidin Domain Receptor 1, Cd167 Anti Family Member A, Cell Adhesion Kinase, Discoidin Receptor T Kinase, Hgk2, Mammary Carcinoma Kinase 10, Mck-10, Protein- Kinase 3a, Protein-Tyrosine Kinase Rtk-6, Trk E, Tyrosine K Tyrosine-Protein Kinase Cak, Cd167a; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfb-Lic-Bse Other_details: Mammalian Gene Collection (Mgc)
symmetry	Space Group: P 21 21 21	R_factor 0.156 R_Free 0.176
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.074 60.074 180.575 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	EDO, STI	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural mechanisms determining inhibition of the collagen receptor DDR1 by selective and multi-targeted type II kinase inhibitors., Canning P, Tan L, Chu K, Lee SW, Gray NS, Bullock AN, J Mol Biol. 2014 Apr 22. pii: S0022-2836(14)00198-3. doi:, 10.1016/j.jmb.2014.04.014. PMID:24768818

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (208 Kb) [Save to disk] Biological Unit Coordinates (4bkj.pdb1.gz) 102 Kb Biological Unit Coordinates (4bkj.pdb2.gz) 101 Kb LPC: Ligand-Protein Contacts for 4BKJ CSU: Contacts of Structural Units for 4BKJ Structure Factors (2581 Kb) Retrieve 4BKJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BKJ from S2C, [Save to disk] Re-refined 4bkj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BKJ in 3D

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Visual 3D analysis of 4BKJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BKJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bkj] [4bkj_A] [4bkj_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4BKJ: [TyrKc ] by SMART

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