4BKQ Enoyl-ACP reductase from Yersinia pestis (wildtype)with cofactor NADH date
authors Hirschbeck, M.W., Neckles, C., Tonge, P.J., Kisker, C.
compound source
symmetry
R_factor
R_Free 0.2298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand NAI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSelectivity of Pyridone- and Diphenyl Ether-Based Inhibitors for the Yersinia pestis FabV Enoyl-ACP Reductase., Neckles C, Pschibul A, Lai CT, Hirschbeck M, Kuper J, Davoodi S, Zou J, Liu N, Pan P, Shah S, Daryaee F, Bommineni GR, Lai C, Simmerling C, Kisker C, Tonge PJ, Biochemistry. 2016 May 31;55(21):2992-3006. doi: 10.1021/acs.biochem.5b01301., Epub 2016 May 17. PMID:27136302
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (4bkq.pdb1.gz) 271 Kb
  • LPC: Ligand-Protein Contacts for 4BKQ
  • CSU: Contacts of Structural Units for 4BKQ
  • Structure Factors (1082 Kb)
  • Retrieve 4BKQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BKQ from S2C, [Save to disk]
  • Re-refined 4bkq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BKQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BKQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BKQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bkq_A] [4bkq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BKQ
  • Community annotation for 4BKQ at PDBWiki (http://pdbwiki.org)

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