4BPL	Transport Protein	date	May 27, 2013
title	Rice Importin_alpha In Complex With Nucleoplasmin Nls
authors	C.W.Chang, R.M.Counago, S.J.Williams, B.Kobe
compound		source
Molecule: Importin Subunit Alpha-1a Chain: A Fragment: Residues 73-526 Engineered: Yes		Organism_scientific: Oryza Sativa Organism_common: Rice Organism_taxid: 4530 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet30a Expression_system_plasmid: Pet30a_rimpalpha1a_dibb
Molecule: Nucleoplasmin Nls Chain: B Engineered: Yes		Organism_scientific: Xenopus Organism_taxid: 8353 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pgex2t Expression_system_plasmid: Pgex2t-Nucleoplasminnls
symmetry	Space Group: P 2 21 21	R_factor 0.200 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.221 74.093 138.027 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis of Interaction of Bipartite Nuclear Localization Signal from Agrobacterium VirD2 with Rice Importin-alpha, Chang CW, Williams SJ, Counago RM, Kobe B, Mol Plant. 2014 Feb 6. PMID:24503158

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk] Biological Unit Coordinates (4bpl.pdb1.gz) 140 Kb CSU: Contacts of Structural Units for 4BPL Structure Factors (867 Kb) Retrieve 4BPL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BPL from S2C, [Save to disk] Re-refined 4bpl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BPL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BPL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BPL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bpl_B] [4bpl] [4bpl_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4BPL: [ARM ] by SMART

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