4BQV	Hydrolase	date	Jun 03, 2013
title	Mouse Cathepsin S With Covalent Ligand
authors	D.W.Banner, J.Benz, B.Gsell, M.Stihle, A.Ruf, W.Haap
compound		source
Molecule: Cathepsin S Chain: A, B, C, D, E, F, G, H Fragment: Residues 116-340 Ec: 3.4.22.27 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.20184 R_Free 0.23997
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.884 66.984 103.330 90.04 96.68 89.90
method	X-Ray Diffraction	resolution	1.70 Å
ligand	8PW	enzyme	Hydrolase E.C.3.4.22.27 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (309 Kb) [Save to disk] Biological Unit Coordinates (4bqv.pdb1.gz) 43 Kb Biological Unit Coordinates (4bqv.pdb2.gz) 42 Kb Biological Unit Coordinates (4bqv.pdb3.gz) 42 Kb Biological Unit Coordinates (4bqv.pdb4.gz) 43 Kb Biological Unit Coordinates (4bqv.pdb5.gz) 42 Kb Biological Unit Coordinates (4bqv.pdb6.gz) 42 Kb Biological Unit Coordinates (4bqv.pdb7.gz) 42 Kb Biological Unit Coordinates (4bqv.pdb8.gz) 42 Kb LPC: Ligand-Protein Contacts for 4BQV CSU: Contacts of Structural Units for 4BQV Structure Factors (3324 Kb) Retrieve 4BQV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BQV from S2C, [Save to disk] Re-refined 4bqv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BQV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BQV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BQV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bqv_D] [4bqv] [4bqv_G] [4bqv_F] [4bqv_A] [4bqv_C] [4bqv_E] [4bqv_B] [4bqv_H] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4BQV: [Pept_C1 ] by SMART

Other resources with information on 4BQV

Community annotation for 4BQV at PDBWiki (http://pdbwiki.org)

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