4BS2 NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA date
authors Lukavsky, P.J., Daujotyte, D., Tollervey, J.R., Ule, J., Stuani, C., Buratti, E., Baralle, F.E., Damberger, F.F., Allain, F.H.T.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis of UG-rich RNA recognition by the human splicing factor TDP-43., Lukavsky PJ, Daujotyte D, Tollervey JR, Ule J, Stuani C, Buratti E, Baralle FE, Damberger FF, Allain FH, Nat Struct Mol Biol. 2013 Nov 17. doi: 10.1038/nsmb.2698. PMID:24240615
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1202 Kb) [Save to disk]
  • Biological Unit Coordinates (4bs2.pdb1.gz) 53 Kb
  • CSU: Contacts of Structural Units for 4BS2
  • Original NMR restraints for 4BS2 from PDB
  • Retrieve 4BS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BS2 from S2C, [Save to disk]
  • View 4BS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BS2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BS2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bs2_B] [4bs2_A] [4bs2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BS2: [RRM ] by SMART
  • Other resources with information on 4BS2
  • Community annotation for 4BS2 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science