4C5E Crystal structure of the minimal Pho-Sfmbt complex (P21 spacegroup) date
authors Alfieri, C., Glatt, S., Mueller, C.W.
compound source
symmetry
R_factor
R_Free 0.1976
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural basis for targeting the chromatin repressor Sfmbt to Polycomb response elements., Alfieri C, Gambetta MC, Matos R, Glatt S, Sehr P, Fraterman S, Wilm M, Muller J, Muller CW, Genes Dev. 2013 Nov 1;27(21):2367-79. doi: 10.1101/gad.226621.113. PMID:24186981
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (638 Kb) [Save to disk]
  • Biological Unit Coordinates (4c5e.pdb1.gz) 629 Kb
  • CSU: Contacts of Structural Units for 4C5E
  • Structure Factors (1489 Kb)
  • Retrieve 4C5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C5E from S2C, [Save to disk]
  • Re-refined 4c5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4C5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4C5E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4C5E, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c5e_C] [4c5e] [4c5e_A] [4c5e_D] [4c5e_B] [4c5e_F] [4c5e_G] [4c5e_H] [4c5e_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4C5E: [MBT ] by SMART
    • Other resources with information on 4C5E
  • Community annotation for 4C5E at PDBWiki (http://pdbwiki.org)

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