4C8B	Structure of the kinase domain of human RIPK2 in complex with ponatinib	date
authors	Canning, P., Krojer, T., Bradley, A., Mahajan, P., Goubin, S., Delft, F.von., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.
compound		source
symmetry		R_factor R_Free 0.24361
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.75
ligand	0LI, EDO	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Inflammatory Signaling by NOD-RIPK2 Is Inhibited by Clinically Relevant Type II Kinase Inhibitors., Canning P, Ruan Q, Schwerd T, Hrdinka M, Maki JL, Saleh D, Suebsuwong C, Ray S, Brennan PE, Cuny GD, Uhlig HH, Gyrd-Hansen M, Degterev A, Bullock AN, Chem Biol. 2015 Sep 17;22(9):1174-84. doi: 10.1016/j.chembiol.2015.07.017. Epub, 2015 Aug 27. PMID:26320862

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk] Biological Unit Coordinates (4c8b.pdb1.gz) 179 Kb LPC: Ligand-Protein Contacts for 4C8B CSU: Contacts of Structural Units for 4C8B Structure Factors (975 Kb) Retrieve 4C8B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4C8B from S2C, [Save to disk] Re-refined 4c8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4C8B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4C8B

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4C8B, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4c8b_B] [4c8b_A] [4c8b] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4C8B: [STYKc ] by SMART

Other resources with information on 4C8B

Community annotation for 4C8B at PDBWiki (http://pdbwiki.org)

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