4CFM Structure-based design of C8-substituted O6-cyclohexylmethoxyguanine CDK1 and 2 inhibitors. date
authors Carbain, B., Paterson, D.J., Anscombe, E., Campbell, A., Cano, C., Echalier, A., Endicott, J., Golding, B.T., Haggerty, K., Hardcastle, I.R., Jewsbury, P., Newell, D.R., Noble, M.E.M., Roche, C., Wang, L.Z., Griffin, R.
compound source
symmetry
R_factor
R_Free 0.25806
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand 4QE, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary reference8-Substituted O6-Cyclohexylmethylguanine CDK2 Inhibitors; Using Structure-Based Inhibitor Design to Optimise an Alternative Binding Mode., Carbain B, Paterson DJ, Anscombe E, Campbell-Dexter A, Cano C, Echalier A, Endicott J, Golding BT, Haggerty K, Hardcastle IR, Jewsbury PJ, Newell DR, Noble M, Roche C, Wang LZ, Griffin RJ, J Med Chem. 2013 Dec 4. PMID:24304238
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk]
  • Biological Unit Coordinates (4cfm.pdb1.gz) 189 Kb
  • Biological Unit Coordinates (4cfm.pdb2.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 4CFM
  • CSU: Contacts of Structural Units for 4CFM
  • Structure Factors (651 Kb)
  • Retrieve 4CFM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CFM from S2C, [Save to disk]
  • Re-refined 4cfm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CFM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CFM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CFM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cfm_C] [4cfm_D] [4cfm_B] [4cfm] [4cfm_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4CFM: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART
    • Other resources with information on 4CFM
  • Community annotation for 4CFM at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science