4CGS	Transcription	date	Nov 26, 2013
title	Crystal Structure Of The N-Terminal Domain Of The Pa Subunit Of Dhori Virus Polymerase
authors	D.Guilligay, J.Kadlec, T.Crepin, T.Lunardi, D.Bouvier, G.Kochs, R.W.H.Ruigrok, S.Cusack
compound		source
Molecule: Polymerase Subunit Pa Chain: A, B Fragment: N-Terminal Domain, Residues 1-171 Engineered: Yes		Organism_scientific: Dhori Virus Organism_taxid: 11318 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Codon Plus-Ril Expression_system_vector_type: Plasmid Expression_system_vector: Pet-M11
symmetry	Space Group: P 1 21 1	R_factor 0.17280 R_Free 0.21964
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.910 87.450 56.130 90.00 112.98 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	CME, GOL	enzyme
Primary reference	Comparative structural and functional analysis of orthomyxovirus polymerase cap-snatching domains., Guilligay D, Kadlec J, Crepin T, Lunardi T, Bouvier D, Kochs G, Ruigrok RW, Cusack S, PLoS One. 2014 Jan 15;9(1):e84973. doi: 10.1371/journal.pone.0084973. eCollection, 2014 Jan 15. PMID:24454773

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk] Biological Unit Coordinates (4cgs.pdb1.gz) 69 Kb Biological Unit Coordinates (4cgs.pdb2.gz) 69 Kb LPC: Ligand-Protein Contacts for 4CGS CSU: Contacts of Structural Units for 4CGS Structure Factors (978 Kb) Retrieve 4CGS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4CGS from S2C, [Save to disk] Re-refined 4cgs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4CGS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4CGS

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4CGS, from MSDmotif at EBI Fold representative 4cgs from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4cgs_A] [4cgs] [4cgs_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4CGS

Community annotation for 4CGS at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---