4CHC Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 2) date
authors Guilligay, D., Kadlec, J., Crepin, T., Lunardi, T., Bouvier, D., Kochs, G., Ruigrok, R.W.H., Cusack, S.
compound source
symmetry
R_factor
R_Free 0.27868
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.77
ligand MSE enzyme
Primary referenceComparative structural and functional analysis of orthomyxovirus polymerase cap-snatching domains., Guilligay D, Kadlec J, Crepin T, Lunardi T, Bouvier D, Kochs G, Ruigrok RW, Cusack S, PLoS One. 2014 Jan 15;9(1):e84973. doi: 10.1371/journal.pone.0084973. eCollection, 2014 Jan 15. PMID:24454773
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (319 Kb) [Save to disk]
  • Biological Unit Coordinates (4chc.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (4chc.pdb2.gz) 105 Kb
  • Biological Unit Coordinates (4chc.pdb3.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 4CHC
  • CSU: Contacts of Structural Units for 4CHC
  • Structure Factors (286 Kb)
  • Retrieve 4CHC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CHC from S2C, [Save to disk]
  • Re-refined 4chc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CHC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CHC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CHC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4chc_B] [4chc_F] [4chc_C] [4chc] [4chc_E] [4chc_A] [4chc_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CHC
  • Community annotation for 4CHC at PDBWiki (http://pdbwiki.org)

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