OCA Atlas for 4CQF

4CQF

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

9Z8, DMF, GOL, K, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A, C, D

Primary reference

Molecular basis for the anti-parasitic activity of a mercaptoacetamide derivative that inhibits histone deacetylase 8 (HDAC8) from the human pathogen Schistosoma mansoni., Stolfa DA, Marek M, Lancelot J, Hauser AT, Walter A, Leproult E, Melesina J, Rumpf T, Wurtz JM, Cavarelli J, Sippl W, Pierce RJ, Romier C, Jung M, J Mol Biol. 2014 Mar 20. pii: S0022-2836(14)00131-4. doi:, 10.1016/j.jmb.2014.03.007. PMID:24657767

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (540 Kb) [Save to disk]

Biological Unit Coordinates (4cqf.pdb1.gz) 135 Kb

Biological Unit Coordinates (4cqf.pdb2.gz) 138 Kb

Biological Unit Coordinates (4cqf.pdb3.gz) 141 Kb

Biological Unit Coordinates (4cqf.pdb4.gz) 135 Kb

LPC: Ligand-Protein Contacts for 4CQF

CSU: Contacts of Structural Units for 4CQF

Structure Factors (1047 Kb)

Retrieve 4CQF in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4CQF from S2C, [Save to disk]

Re-refined 4cqf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4CQF in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4cqf] [4cqf_A] [4cqf_B] [4cqf_C] [4cqf_D]

SWISS-PROT database:

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