4CX9 The 5-coordinate proximal NO complex of cytochrome c prime from Shewanella frigidimarina date
authors Manole, A.A., Kekilli, D., Dobbin, P.S., Hough, M.A.
compound source
symmetry
R_factor
R_Free 0.18631
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.43
ligand GOL, HEC, NO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceConformational control of the binding of diatomic gases to cytochrome c'., Manole A, Kekilli D, Svistunenko DA, Wilson MT, Dobbin PS, Hough MA, J Biol Inorg Chem. 2015 Mar 20. PMID:25792378
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4cx9.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 4CX9
  • CSU: Contacts of Structural Units for 4CX9
  • Structure Factors (2452 Kb)
  • Retrieve 4CX9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CX9 from S2C, [Save to disk]
  • Re-refined 4cx9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CX9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CX9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CX9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cx9_B] [4cx9_A] [4cx9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CX9
  • Community annotation for 4CX9 at PDBWiki (http://pdbwiki.org)

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