OCA Atlas for 4CYU

4CYU

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

APC, MG, TRS

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, D, A, C

Primary reference

Structure-based design and development of functionalized Mercaptoguanine derivatives as inhibitors of the folate biosynthesis pathway enzyme 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Staphylococcus aureus., Dennis ML, Chhabra S, Wang ZC, Debono A, Dolezal O, Newman J, Pitcher NP, Rahmani R, Cleary B, Barlow N, Hattarki M, Graham B, Peat TS, Baell JB, Swarbrick JD, J Med Chem. 2014 Nov 26;57(22):9612-26. doi: 10.1021/jm501417f. Epub 2014 Nov 12. PMID:25357262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]

Biological Unit Coordinates (4cyu.pdb1.gz) 29 Kb

Biological Unit Coordinates (4cyu.pdb2.gz) 29 Kb

Biological Unit Coordinates (4cyu.pdb3.gz) 29 Kb

Biological Unit Coordinates (4cyu.pdb4.gz) 29 Kb

LPC: Ligand-Protein Contacts for 4CYU

CSU: Contacts of Structural Units for 4CYU

Structure Factors (350 Kb)

Retrieve 4CYU in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4CYU from S2C, [Save to disk]

Re-refined 4cyu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4CYU in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4cyu] [4cyu_A] [4cyu_B] [4cyu_C] [4cyu_D]

SWISS-PROT database:

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