4D3S Imine reductase from Nocardiopsis halophila date
authors Man, H., Hart, S., Turkenburg, J.P., Grogan, G.
compound source
symmetry
R_factor
R_Free 0.26577
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.24
ligand BOG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceStructure, Activity and Stereoselectivity of NADPH-Dependent Oxidoreductases Catalysing the S-Selective Reduction of the Imine Substrate 2-Methylpyrroline., Man H, Wells E, Hussain S, Leipold F, Hart S, Turkenburg JP, Turner NJ, Grogan G, Chembiochem. 2015 Mar 24. doi: 10.1002/cbic.201402625. PMID:25809902
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (332 Kb) [Save to disk]
  • Biological Unit Coordinates (4d3s.pdb1.gz) 83 Kb
  • Biological Unit Coordinates (4d3s.pdb2.gz) 87 Kb
  • Biological Unit Coordinates (4d3s.pdb3.gz) 87 Kb
  • Biological Unit Coordinates (4d3s.pdb4.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 4D3S
  • CSU: Contacts of Structural Units for 4D3S
  • Structure Factors (6012 Kb)
  • Retrieve 4D3S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4D3S from S2C, [Save to disk]
  • Re-refined 4d3s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4D3S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4D3S
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4D3S, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d3s] [4d3s_A] [4d3s_H] [4d3s_D] [4d3s_G] [4d3s_F] [4d3s_B] [4d3s_E] [4d3s_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4D3S
  • Community annotation for 4D3S at PDBWiki (http://pdbwiki.org)

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