4D4W Solution structure of human MBD1 CXXC1 domain date
authors Thomson, R., Smith, B.O.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of human MBD1 CXXC1., Thomson R, Smith BO, J Biomol NMR. 2015 Nov;63(3):309-14. doi: 10.1007/s10858-015-9986-8. Epub 2015, Sep 9. PMID:26354109
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (435 Kb) [Save to disk]
  • Biological Unit Coordinates (4d4w.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 4D4W
  • Original NMR restraints for 4D4W from PDB
  • Retrieve 4D4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4D4W from S2C, [Save to disk]
  • View 4D4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4D4W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d4w] [4d4w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4D4W
  • Community annotation for 4D4W at PDBWiki (http://pdbwiki.org)

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