4D7A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMP, GOL, K, NA, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, C, A


Primary referenceThe Crystal Structure and Small-Angle X-Ray Analysis of CsdL/TcdA Reveal a New tRNA Binding Motif in the MoeB/E1 Superfamily., Lopez-Estepa M, Arda A, Savko M, Round A, Shepard WE, Bruix M, Coll M, Fernandez FJ, Jimenez-Barbero J, Vega MC, PLoS One. 2015 Apr 21;10(4):e0118606. doi: 10.1371/journal.pone.0118606., eCollection 2015. PMID:25897750
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (321 Kb) [Save to disk]
  • Biological Unit Coordinates (4d7a.pdb1.gz) 157 Kb
  • Biological Unit Coordinates (4d7a.pdb2.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 4D7A
  • CSU: Contacts of Structural Units for 4D7A
  • Structure Factors (531 Kb)
  • Retrieve 4D7A in mmCIF format [Save to disk]
  • Re-refined 4d7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4D7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d7a] [4d7a_A] [4d7a_B] [4d7a_C] [4d7a_D]
  • SWISS-PROT database:

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