| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (461 Kb) [Save to disk]
 - Biological Unit Coordinates (4db1.pdb1.gz) 230 Kb
- Biological Unit Coordinates (4db1.pdb2.gz) 227 Kb
- Biological Unit Coordinates (4db1.pdb3.gz) 453 Kb
- LPC: Ligand-Protein Contacts for 4DB1
- CSU: Contacts of Structural Units for 4DB1
- Structure Factors (709 Kb)
- Retrieve 4DB1 in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 4DB1
from S2C,
[Save to disk]
- Re-refined 4db1 structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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| View 4DB1 in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
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| Visual 3D analysis of 4DB1 |
- Ramachandran
plot from PDBSum
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| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 4DB1,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1k4db1, region B:1-107
[Jmol]
[rasmolscript]
[script source]
- Domain d1t4db1, region B:1-133,B:355-367
[Jmol]
[rasmolscript]
[script source]
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [4db1_A] [4db1] [4db1_B]
- SWISS-PROT database:
- Domain organization of by SWISSPFAM
- Domain found in 4DB1: [MYSc
] by SMART
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Other resources with information on 4DB1 |
- Community annotation for 4DB1 at PDBWiki (http://pdbwiki.org)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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