4DDJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	LDA	enzyme
note	4DDJ is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of saposin A lipoprotein discs., Popovic K, Holyoake J, Pomes R, Prive GG, Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2908-12. Epub 2012 Feb 2. PMID:22308394

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (4ddj.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 4DDJ CSU: Contacts of Structural Units for 4DDJ Structure Factors (140 Kb) Retrieve 4DDJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DDJ from S2C, [Save to disk] Re-refined 4ddj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DDJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ddj] [4ddj_A] SWISS-PROT database: Domain found in 4DDJ: [SapB ] by SMART

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