4DDN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, A, D


Primary referenceIpomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus., Chang WC, Liu KL, Hsu FC, Jeng ST, Cheng YS, PLoS One. 2012;7(7):e40618. Epub 2012 Jul 11. PMID:22808208
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (4ddn.pdb1.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 4DDN
  • CSU: Contacts of Structural Units for 4DDN
  • Structure Factors (374 Kb)
  • Retrieve 4DDN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DDN from S2C, [Save to disk]
  • Re-refined 4ddn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DDN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ddn] [4ddn_A] [4ddn_B] [4ddn_C] [4ddn_D]
  • SWISS-PROT database:
  • Domain found in 4DDN: [Jacalin ] by SMART

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