4DEN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, MAN enzyme
Primary referenceStructural insights into the specific anti-HIV property of actinohivin: structure of its complex with the alpha(1-2)mannobiose moiety of gp120., Hoque MM, Suzuki K, Tsunoda M, Jiang J, Zhang F, Takahashi A, Ohbayashi N, Zhang X, Tanaka H, Omura S, Takenaka A, Acta Crystallogr D Biol Crystallogr. 2012 Dec;68(Pt 12):1671-9. doi:, 10.1107/S0907444912040498. Epub 2012 Nov 9. PMID:23151632
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (4den.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 4DEN
  • CSU: Contacts of Structural Units for 4DEN
  • Structure Factors (176 Kb)
  • Retrieve 4DEN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DEN from S2C, [Save to disk]
  • Re-refined 4den structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DEN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4den] [4den_A]
  • SWISS-PROT database:
  • Domain found in 4DEN: [RICIN ] by SMART

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