4DJR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	0KJ, PO4	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Design, Synthesis, and Biological and Structural Evaluations of Novel HIV-1 Protease Inhibitors To Combat Drug Resistance., Parai MK, Huggins DJ, Cao H, Nalam MN, Ali A, Schiffer CA, Tidor B, Rana TM, J Med Chem. 2012 Jul 26;55(14):6328-41. Epub 2012 Jul 13. PMID:22708897

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (4djr.pdb1.gz) 71 Kb LPC: Ligand-Protein Contacts for 4DJR CSU: Contacts of Structural Units for 4DJR Structure Factors (327 Kb) Retrieve 4DJR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DJR from S2C, [Save to disk] Re-refined 4djr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DJR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4DJR

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4DJR, from MSDmotif at EBI Fold representative 4djr from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4djr] [4djr_A] [4djr_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4DJR

Community annotation for 4DJR at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---