4DKR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 0LJ, EPE, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceStructure-Based Design, Synthesis, and Characterization of Dual Hotspot Small-Molecule HIV-1 Entry Inhibitors., Lalonde JM, Kwon YD, Jones DM, Sun AW, Courter JR, Soeta T, Kobayashi T, Princiotto AM, Wu X, Schon A, Freire E, Kwong PD, Mascola JR, Sodroski J, Madani N, Smith AB 3rd, J Med Chem. 2012 Apr 23. PMID:22497421
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (4dkr.pdb1.gz) 120 Kb
  • Biological Unit Coordinates (4dkr.pdb2.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4DKR
  • CSU: Contacts of Structural Units for 4DKR
  • Structure Factors (608 Kb)
  • Retrieve 4DKR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DKR from S2C, [Save to disk]
  • Re-refined 4dkr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DKR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dkr] [4dkr_A] [4dkr_C]
  • SWISS-PROT database:

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