4DQY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, F


D, A


Primary referenceStructural basis for DNA damage-dependent poly(ADP-ribosyl)ation by human PARP-1., Langelier MF, Planck JL, Roy S, Pascal JM, Science. 2012 May 11;336(6082):728-32. PMID:22582261
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (516 Kb) [Save to disk]
  • Biological Unit Coordinates (4dqy.pdb1.gz) 278 Kb
  • Biological Unit Coordinates (4dqy.pdb2.gz) 278 Kb
  • LPC: Ligand-Protein Contacts for 4DQY
  • CSU: Contacts of Structural Units for 4DQY
  • Structure Factors (1701 Kb)
  • Retrieve 4DQY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DQY from S2C, [Save to disk]
  • Re-refined 4dqy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DQY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dqy] [4dqy_A] [4dqy_B] [4dqy_C] [4dqy_D] [4dqy_E] [4dqy_F] [4dqy_M] [4dqy_N]
  • SWISS-PROT database:
  • Domains found in 4DQY: [PADR1] [WGR] [zf-PARP ] by SMART

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