4DR8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EDO, FMT, ZN enzyme
Gene SYC0213 (D. cantabrica); YP (D. cantabrica)
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, B


Primary referenceStructure and function of a cyanophage-encoded peptide deformylase., Frank JA, Lorimer D, Youle M, Witte P, Craig T, Abendroth J, Rohwer F, Edwards RA, Segall AM, Burgin AB Jr, ISME J. 2013 Feb 14. doi: 10.1038/ismej.2013.4. PMID:23407310
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk]
  • Biological Unit Coordinates (4dr8.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (4dr8.pdb2.gz) 65 Kb
  • Biological Unit Coordinates (4dr8.pdb3.gz) 64 Kb
  • Biological Unit Coordinates (4dr8.pdb4.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 4DR8
  • CSU: Contacts of Structural Units for 4DR8
  • Structure Factors (4977 Kb)
  • Retrieve 4DR8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DR8 from S2C, [Save to disk]
  • Re-refined 4dr8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DR8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dr8] [4dr8_A] [4dr8_B] [4dr8_C] [4dr8_D]
  • SWISS-PROT database:

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