4DU4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 4DU, CA, DOC, DTP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA-directed DNA polymerase ...
  • nuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


    • Primary referenceProbing Minor Groove Hydrogen Bonding Interactions between RB69 DNA Polymerase and DNA., Xia S, Christian TD, Wang J, Konigsberg WH, Biochemistry. 2012 May 17. PMID:22571765
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (339 Kb) [Save to disk]
  • Biological Unit Coordinates (4du4.pdb1.gz) 331 Kb
  • LPC: Ligand-Protein Contacts for 4DU4
  • CSU: Contacts of Structural Units for 4DU4
  • Structure Factors (801 Kb)
  • Retrieve 4DU4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DU4 from S2C, [Save to disk]
  • Re-refined 4du4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DU4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4du4] [4du4_A] [4du4_P] [4du4_T]
  • SWISS-PROT database:
  • Domain found in 4DU4: [POLBc ] by SMART

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