4DXR Human SUN2-KASH1 complex date 2012-02-28
authors Sosa, B., Schwartz, T.U.
compound source
symmetry
R_factor
R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.32
ligand DMU, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLINC Complexes Form by Binding of Three KASH Peptides to Domain Interfaces of Trimeric SUN Proteins., Sosa BA, Rothballer A, Kutay U, Schwartz TU, Cell. 2012 May 25;149(5):1035-47. PMID:22632968
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (4dxr.pdb1.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 4DXR
  • CSU: Contacts of Structural Units for 4DXR
  • Structure Factors (114 Kb)
  • Retrieve 4DXR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DXR from S2C, [Save to disk]
  • Re-refined 4dxr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DXR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4DXR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4DXR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dxr] [4dxr_A] [4dxr_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4DXR: [KASH ] by SMART
  • Other resources with information on 4DXR
  • Community annotation for 4DXR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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