4DXX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DMS, GOL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHot spot analysis to dissect the functional protein-protein interface of a tRNA-modifying enzyme., Jakobi S, Nguyen TX, Debaene F, Metz A, Sanglier-Cianferani S, Reuter K, Klebe G, Proteins. 2014 Jun 28. doi: 10.1002/prot.24637. PMID:24975703
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (4dxx.pdb1.gz) 134 Kb
  • LPC: Ligand-Protein Contacts for 4DXX
  • CSU: Contacts of Structural Units for 4DXX
  • Structure Factors (1603 Kb)
  • Retrieve 4DXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DXX from S2C, [Save to disk]
  • Re-refined 4dxx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dxx] [4dxx_A]
  • SWISS-PROT database:

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