4E4D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL	enzyme
Gene Ontology	Chain Function Process Component X
Primary reference	RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor., Nelson CA, Warren JT, Wang MW, Teitelbaum SL, Fremont DH, Structure. 2012 Oct 2. pii: S0969-2126(12)00334-6. doi:, 10.1016/j.str.2012.08.030. PMID:23039992

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (4e4d.pdb1.gz) 247 Kb Biological Unit Coordinates (4e4d.pdb2.gz) 292 Kb LPC: Ligand-Protein Contacts for 4E4D CSU: Contacts of Structural Units for 4E4D Structure Factors (231 Kb) Retrieve 4E4D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4E4D from S2C, [Save to disk] Re-refined 4e4d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4E4D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4e4d] [4e4d_R] [4e4d_X] SWISS-PROT database: Domains found in 4E4D: [TNF] [TNFR ] by SMART

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