4EZW Crystal structure of the substrate binding domain of E.coli DnaK in complex with the designer peptide NRLLLTG date
authors Zahn, M., Straeter, N.
compound source
symmetry
R_factor
R_Free 0.22628
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand SO4 enzyme
Primary referenceStructural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK., Zahn M, Berthold N, Kieslich B, Knappe D, Hoffmann R, Strater N, J Mol Biol. 2013 Apr 2. pii: S0022-2836(13)00208-8. doi:, 10.1016/j.jmb.2013.03.041. PMID:23562829
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (286 Kb) [Save to disk]
  • Biological Unit Coordinates (4ezw.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (4ezw.pdb2.gz) 72 Kb
  • Biological Unit Coordinates (4ezw.pdb3.gz) 72 Kb
  • Biological Unit Coordinates (4ezw.pdb4.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 4EZW
  • CSU: Contacts of Structural Units for 4EZW
  • Structure Factors (3717 Kb)
  • Retrieve 4EZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EZW from S2C, [Save to disk]
  • Re-refined 4ezw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4EZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4EZW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EZW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ezw_E] [4ezw_B] [4ezw] [4ezw_H] [4ezw_G] [4ezw_A] [4ezw_D] [4ezw_F] [4ezw_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4EZW
  • Community annotation for 4EZW at PDBWiki (http://pdbwiki.org)

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